COPASI: biochemical network simulator

COPASI is a software application for simulation and analysis of biochemical networks and their dynamics. COPASI is a stand-alone program that supports models in the SBML standard and can simulate their behavior using ODEs or Gillespie's stochastic simulation algorithm; arbitrary discrete events can be included in such simulations.

COPASI carries out several analyses of the network and its dynamics and has extensive support for parameter estimation and optimization. COPASI provides means to visualize data in customizable plots, histograms and animations of network diagrams. (list of features).

COPASI 4.6 (Build-32) language bindings
By: gauges  on: Tue 27 of July, 2010 07:48 EDT  (40 Reads)

COPASI 4.6 (Build-32) language bindings

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COPASI 4.6 (Build 32) Released
By: Stefan Hoops  on: Wed 21 of July, 2010 16:31 EDT  (138 Reads)

The COPASI team announces the immediate availability of the stable release COPASI 4.6 (Build 32).

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COPASI User Workshop Announcement
By: Stefan Hoops  on: Tue 23 of March, 2010 11:38 EDT  (598 Reads)

The COPASI team announces the User Workshop for the summer 2010. The 3 day Modeling and Simulation in Systems Biology course will be offered at VBI, Blacksburg, USA

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COPASI 4.5.31 (development) Released
By: Stefan Hoops  on: Thu 18 of March, 2010 09:18 EDT  (1021 Reads)

The COPASI team announces the immediate availability of the development release COPASI 4.5.31 (development).

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Collaboration with Cao's group on stochastic algorithms
By: mendes  on: Thu 25 of Feb., 2010 08:10 EST  (394 Reads)

The COPASI team, through Dr. Stefan Hoops, initiated a collaboration with the group of Dr. Yang Cao, from Virginia Tech's Computer Science Department. The collaboration is focused on improving stochastic simulation methods.

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New Build 30 Language Bindings for Windows
By: gauges  on: Wed 27 of May, 2009 09:58 EDT  (2281 Reads)

Updated language bindings for Build-30

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COPASI User Workshop Announcement
By: Stefan Hoops  on: Mon 18 of May, 2009 11:10 EDT  (2339 Reads)

The COPASI team announces 2 Workshops for the summer 2009. The 3 day Modelling and Simulation in Systems Biology courses will be offerd at VBI, Blacksburg, USA and MCISB Manchester, UK.

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Language Bindings for COPASI 4.5 (Build 30)
By: gauges  on: Fri 17 of April, 2009 03:03 EDT  (2374 Reads)

New language bindings for Build 30 released

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COPASI 4.5 (Build 30) Released
By: Stefan Hoops  on: Tue 14 of April, 2009 12:22 EDT  (2908 Reads)

A new stable release COPASI 4.5 (Build 30) is now available.

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COPASI 4.4.29 (development) Released
By: Stefan Hoops  on: Mon 05 of Jan., 2009 16:31 EST  (2633 Reads)

The COPASI team announces the immediate availability of the development release COPASI 4.4.29 (development).

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