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4.12 (Build 81) Apr 18, 2014

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COPASI: biochemical network simulator

COPASI is a software application for simulation and analysis of biochemical networks and their dynamics. COPASI is a stand-alone program that supports models in the SBML standard and can simulate their behavior using ODEs or Gillespie's stochastic simulation algorithm; arbitrary discrete events can be included in such simulations.

COPASI carries out several analyses of the network and its dynamics and has extensive support for parameter estimation and optimization. COPASI provides means to visualize data in customizable plots, histograms and animations of network diagrams. (list of features).

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Places Still Available: COPASI User Workshop 2014, July 08 - July 10
By: Stefan Hoops  on: Thu 22 of May, 2014 16:15 EDT  (386 Reads)
Meetings
We have still some place available in our User Workshop in the summer 2014. The three day Modeling and Simulation in Systems Biology course will be offered at the Virginia Tech Research Center, Arlington, USA
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COPASI 4.12 (Build 81) Released
By: Stefan Hoops  on: Fri 18 of April, 2014 14:33 EDT  (1285 Reads)
Release
The COPASI team announces the immediate availability of the stable release COPASI 4.12 (Build 81).
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COPASI @ Mathematical Biosciences Institute: How to Simulate and Analyze Your Cancer Models with COPASI
By: Stefan Hoops  on: Mon 07 of April, 2014 10:55 EDT  (396 Reads)
Meetings
The COPASI Team is offering a 3 day boot camp at the Mathematical Biosciences Institute at Ohio State University from September 29 - October 1 2014.
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COPASI User Workshop 2014 in Arlington, Virginia, July 08 - July 10
By: Stefan Hoops  on: Tue 18 of Feb., 2014 12:19 EST  (554 Reads)
Meetings
The COPASI team announces the User Workshop for the summer 2014. The 3 day Modeling and Simulation in Systems Biology course will be offered at the Virginia Tech Research Center, Arlington, USA
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COPASI 4.11 (Build 65) Released
By: Stefan Hoops  on: Mon 30 of Sept., 2013 14:32 EDT  (2822 Reads)
Release
The COPASI team announces the immediate availability of the stable release COPASI 4.11 (Build 65).
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SBML Package for Network Diagrams
By: Stefan Hoops  on: Tue 20 of Aug., 2013 14:44 EDT  (1208 Reads)
Collaboration
SBML Level 3 Layout Package was officially released.
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User Workshop in Manchester, UK, September 9-11, 2013
By:   on: Fri 09 of Aug., 2013 11:41 EDT  (1038 Reads)
Meetings
Announcing another COPASI User Workshop, this one will take place in the School of Computer Science, University of Manchester, UK, September 9-11 2013. Free registrations are open now!

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COPASI 4.10 (Build 55) Released
By: Stefan Hoops  on: Thu 16 of May, 2013 17:58 EDT  (2773 Reads)
Release
The COPASI team announces the immediate availability of the stable release COPASI 4.10 (Build 55).
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Online Registration for COPASI User Workshop in Virginia, July 08 - July 10 2013
By: Stefan Hoops  on: Thu 25 of April, 2013 13:16 EDT  (1456 Reads)
Meetings
The online registration is now available for the COPASI User Workshop in Virginia, July 08 - July 10 2013.
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A survey about SBGN
By: Frank T. Bergmann  on: Wed 24 of April, 2013 11:09 EDT  (1299 Reads)
Collaboration
The SBGN editors ask for feedback on how widely SBGN is used https://www.surveymonkey.com/s/96ZFGCV

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